Boutique hotel vacation rentals in Shinjuku

4.93 out of 5 average rating, 107 reviews

A traditional Japanese-style room is presented, featuring tatami flooring and a low wooden table. Zabuton cushions are arranged around the table. In the background, a modern kitchen is visible, with a dining area that includes several chairs and soft lighting.

Hotel room in Chuo City

90sqm. Tatami, traditional Japanese style room

Our room is featured real Japanese style. Many Japanese also love this simple and traditional space. It'll be chance to know real Japan! 3 subway 5 mins walk. Tukiji 5 mins by subway, Ginza, Akiba, Asakusa, 15mins by subway without transfer. Here is popular for large family trip. We have 3 separate room with bed and FUTON. Especially family with kids can choose many baby equipment. From NARITA Airport 55 min, HANEDA 25min. We can store your luggage before check-in or after check-out for free!

4.88 out of 5 average rating, 690 reviews

Hotel room in Ueno

The Hideout Tokyo -(Double Room)-

We're Central Tokyo's family run hotel for those who want to travel in style. Our petite 5-room hotel offers reasonably priced compact yet cozy accommodation with many of the features you'd expect from a larger,branded property. Private shower&sink. We're located walking distance from many of Tokyo's finest sightseeing spots and just a 4/2 minute walk from JR Yamanote line,Subway Hibiya line connecting you quickly to the rest of the city. ※We’re legal hotel with hotel permit from the government

Hotel room in Shinjuku City

A modern bedroom is shown, featuring two spacious beds with crisp white linens. Soft lighting is provided by wall-mounted lamps on either side. A compact desk with a chair is placed against a concrete wall, and a window provides natural light with a curtain in a light hue.

4.82 out of 5 average rating, 104 reviews

DOMO HOTEL-11

DOMO HOTEL is located in the Shinjuku area, within walking distance of JR Shin-Okubo Station and Shinjuku Station. A convenience store can be reached in 30 seconds. There are many chain restaurants, cafes, post offices and drug stores around the hotel, taking care of the needs of tourists in every possible way. In order to provide travelers with a brand-new accommodation experience, the hotel has only 12 rooms. From the moment you step into the hotel door, an unprecedented journey begins quietly

4.83 out of 5 average rating, 731 reviews

The room features a modern design with a lofted sleeping area containing two single beds and an additional set of single beds below. A small kitchenette and a wooden staircase are visible, along with large windows providing natural light.

Hotel room in Ryōkoku

4 single beds in Tokyo/2 train stations: Studio B

A quiet, modern & unique structured room with 4single beds & a private bathroom. 2train stations in 10min. walk, easy access to Shinjuku, Shibuya, Akihabara, Asakusa, Tokyo Dome and Disney Resort! Not 24H open reception, MUST arrive by 11PM. After 11PM check in is not available. ＊No early check in (from 3PM) ＊No late check in (by 11PM) ＊No late check out (by 10AM) ＊No discount. ＊Max : 4people. ＊Cleaning will be done once in 5nights. Visit our Studio A room : https://www.airbnb.jp/rooms/40459587

4.91 out of 5 average rating, 102 reviews

The room features two spacious twin beds dressed in neutral tones, with soft linens and pillows. Natural light enters through horizontal blinds on a window. A sleek wooden door leads to a private bathroom, while light wood flooring complements the modern design.

Hotel room in Kagurazaka

Standard Room｜Accessible｜20mShinjuku｜Kagurazaka

Barrier-free room ideal for families or small groups. The ground-floor 30 m² twin sleeps up to 4 with two Simmons double beds. In-room: free Wi-Fi, A/C, mini-fridge, air-purifier, safe, TV and hair-dryer. Bathroom stocked with shampoo, conditioner, body & hand soap, towels, gowns, slippers, toothbrush set, cotton kit, razor, sponge and brush. No on-site parking or washer—please use nearby coin lots and laundromats. Fee-based rentals (limited): hair iron, board games, projector, Fire TV Stick.

A cozy room features a spacious bed with fresh linens, accompanied by a ceiling fan and soft lighting. An open shelving unit displays decorative items, while a bar fridge and microwave are present for convenience. Warm wood flooring adds to the welcoming ambiance.

4.97 out of 5 average rating, 237 reviews

④2020年新築貸切/クイーンベッド/モダンバスルーム/Rain showerサンシャインシティ３分

Newly built with travelers in mind. The rooms are spacious with Queen size beds (practically unheard-of in Japan). Smart TV, Wi-Fi, tea and coffee. The bathrooms are fashionable, with large walk in rain showers. LED mirrors to get you ready for whatever lighting you will encounter. Rooms have a bar fridge, microwave and kettle for you to store and prepare ready-made meals and drinks. All rooms come equipped with Air-conditioning, ceiling fans and black-out curtains. Ample storage space also!

Hotel room in Shinjuku City

A modern room features distinctive purple lighting along the ceiling, paired with soft white walls. A spacious bed is positioned at the back, while a sleek television and mini-fridge are located near a striped couch and a marble accented coffee table.

4.89 out of 5 average rating, 36 reviews

Free late check out ② 10 minutes from Shinjuku

"HOTEL G7" Located in the heart of Kabukicho, the world's biggest entertainment district. 20 minutes walk from Shinjuku Station East Exit. A quick taxi ride. 15 minutes from Higashi-Shinjuku Station to Roppongi. A love hotel = motel, but with a different design. There are no hotels in this location at this price. このエリアはラブホテルエリアですが近年はairbnbで貸し出す事多いです。 Rooms will be assigned randomly. Your room may differ from the one pictured Private toilet and bathroom available All rooms are non-smoking

4.86 out of 5 average rating, 1,022 reviews

The hotel exterior is illuminated at night, highlighting the contemporary architectural design. Large windows display a cozy lobby area with soft seating and decorative wall art. A welcoming sign reflects the hotel's name, contributing to a warm atmosphere.

Hotel room in Asakusa

全新開幕！2房1廳+吧台廚房！4-5人家庭房！浅草寺景觀！陽台晴空塔夜景！直通羽田＆成田機場！

the Moto Hotel Asakusa is a new hotel opened in June 2021. The nearest station is Ginza sen-Asakusa station 7-8mins by walking. JR Ueno station is walking by 30 mins or 3 steps by Ginza Line(from Asakusa station to Ueno station)is 6 mins. Askusa is famous for the Sensō-ji and it's only 1min from us. The development of Asakusa as an entertainment district during the Edo period so there's many delicious & traditional food & store surround us. The Kappabashi Dougu street is 7mins by foot too.

Hotel room in Nishinippori

A spacious living area features a dark leather sectional sofa surrounding a multi-functional table. Light-colored walls and wood flooring enhance the welcoming feel. The room includes a ceiling fan and a staircase leading to the upper level, with a collection of plush toys adding a touch of warmth.

4.88 out of 5 average rating, 198 reviews

Nippori train 2min 6Bed 3WC 2Bath Ueno Akihabara

「MoRi House IN 西日暮里」は 2019年新築の三階建一棟ビル3LDK97㎡寝室3室・トイレ3室・シャワー１室・バスタブ1室・キッチン1室 # 3寝室 -寝室A（ 1階、シングルベッド２床個室） -寝室B （ 3階、ダブルベッド2床備えた個室） -寝室C (3階、ダブルベット2床備えた個室) 家族、親友同士で自宅感覚で寛げる快適空間を提供致します。普通のホテルと違い、システム対面キッチンが備え付けており、就寝は一階と三階別々の部屋で、皆んなの集まりは二階のリビングで、キッチン設備を使ってお好きの料理も作って楽しめる事が可能です。旅先でも自宅にいるような「家族団欒」気分を楽しむ事が出来ます。当施設までのアクセスはとても便利です。成田空港から新三河島駅までは京成線一本で着きます。新三河島駅からは歩いて3分の距離に位置しています。その他最寄り駅までの徒歩所要時間 JP「西日暮里駅」10分、東京メトロ千代田「西日暮里駅」8分　　バス停留所も近くにあります。届出・登録番号旅館業法の許可番号 | 東京都保健所 | 30荒保環き（三）第25号

Hotel room in Shimokitazawa

A modern kitchenette is presented with wooden cabinetry and a concrete countertop. Bar stools are arranged at a small counter, while a large window brings in natural light. Decorative plants and artwork enhance the inviting space.

4.94 out of 5 average rating, 153 reviews

illi Sun Shimokitazawa 301 | 1 min from station

【1 min walk from Shimokitazawa Stn / Max 6 guests/ Entire floor to yourself】 Each of our four rooms features a unique design, adorned with elements that capture the essence of Shimokitazawa's cultural richness and charm. Tailored for travelers in search of a luxurious and playful retreat after exploring the lively streets and vibrant city center. Enter a realm where you can unwind and detach from Tokyo's hectic urban rhythm in a truly remarkable setting.

Hotel room in Suginami City

A vibrant mural depicting a pack of wolves in motion covers the walls and ceiling of the room. The colorful design features flowing patterns and dynamic shapes, creating an immersive environment. Two single beds are positioned against the vivid backdrop, enhancing the artistic atmosphere.

4.94 out of 5 average rating, 106 reviews

Stay in Art 1 min from Koenji Sta./BnA Koenji 2F

BnA Home Koenji is an independent art hotel created by the Bed & Art Project (BnA)—an ambitious and experimental hospitality concept that blends art, community, and immersive travel. At BnA, guests don't just stay at a hotel—they stay inside a work of art. Each room is a one-of-a-kind collaboration, designed and built by local artists, architects, textile designers, and carpenters to create a deeply personal and unforgettable experience.

4.81 out of 5 average rating, 140 reviews

The image displays three smart pods featuring semi-double beds with dark, textured bedding. Each pod includes a mirror and a small hanging area for clothing. Soft lighting creates a calming ambiance, highlighting the modern and organized layout of the sleeping spaces.

Hotel room in Shibuya

TheMillennialsShibuya/Mixed Smart Pod/1 Guest

Welcome to The Millennials Shibuya, a futuristic accommodation facility equipped with the world's first IOT-equipped "Smart Pod" and a lounge with a coworking space. In addition, there are plenty of common spaces, including a 24-hour shared lounge, a 24-hour self-kitchen, a 24-hour working lounge, a shared shower and toilet, and a shared laundry. 20% of the total area of the hotel is allocated to the common area.

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Popular amenities for Shinjuku boutique hotel rentals

Kitchen

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Pool

Free parking on premises

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Family-friendly boutique hotels rentals

The room features a unique wall mural inspired by nature, showcasing stylized trees. Two spacious beds are covered with white linens, accented by soft pillows. A pendant light hangs from a wooden structure above, adding a warm glow to the calming space.

4.97 out of 5 average rating, 192 reviews

2nd Floor Artistic Twin Room Inspired by Noh Dream

A spacious room features a queen size bed with a decorative pillow and a cozy sofa. A flat-screen TV is mounted on the wall. Storage is provided with an open wardrobe and a small desk. Soft lighting illuminates the room, complemented by dark curtains.

4.94 out of 5 average rating, 126 reviews

Modern queen suite with private bathroom - rooftop

A spacious room features a brown double bed with a yellow and blue blanket casually placed. Red sofas create a cozy seating area, complemented by a television and small coffee table. Large windows allow natural light to fill the space, enhanced by soft curtains.

Hotel room in Nakano City

4.57 out of 5 average rating, 153 reviews

Shinjuku 10mins! Relaxing room max 4ppl!

A spacious room features a Queen size bed with crisp white linens and a decorative pillow. A kitchenette area includes a microwave and storage space. Climate control is provided by an air conditioning unit, while warm light from the ceiling fan enhances the neutral wall tones.

4.96 out of 5 average rating, 165 reviews

New-build/family owned/large rooms/wifi/Queenbed

A compact twin room features two spacious beds dressed in light-colored linens. A soft blue accent wall complements the neutral tones. A small desk with amenities is positioned against one wall, and natural light filters through a partially closed sheer curtain.

Hotel room in Nihonbashi

4.71 out of 5 average rating, 143 reviews

New hotel/Compact Twin/2 people

A large window is framed with light-colored curtains, allowing soft light to filter through. The window displays multiple panes and is set against a blue wall. Above, a series of exposed light bulbs provides illumination, creating a warm ambiance.

Hotel room in Sasazuka

4.57 out of 5 average rating, 54 reviews

ザスタンダードアパートメント渋谷笹塚Bルーム　ブルックリンスタイルホテル　お洒落　インスタ映え

A spacious room features a large bed adorned with a patterned comforter and decorative pillows. A small desk with a chair is positioned against a wall, accompanied by a mini refrigerator. Natural light enters through a window, partially covered by a soft curtain.

Hotel room in Shinjuku City

4.69 out of 5 average rating, 42 reviews

Newly opened hotel-style t suite Subway 3 minutes

A vibrant lounge area is depicted, featuring comic-inspired wall art and colorful seating. Tables are designed with bold graphics, and equipped with power outlets. A coffee machine and snack area are visible in this modern space, designed to foster a communal environment.

Hotel room in Asakusa

4.68 out of 5 average rating, 462 reviews

MANGA Design・1 bed・Free simple breakfast・Free wifi

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Boutique hotels rentals with a patio

A rooftop terrace offers diverse seating options, including lounge chairs, tables, and umbrellas. Colorful flags adorn the railing, enhancing the lively atmosphere. Views of the surrounding urban landscape are visible, showcasing the city layout and buildings in the background.

澀谷直達 Skytree車站徒步5分 3间套房 3套卫浴洗衣機電梯機場直達

A rooftop terrace is shown at sunset, featuring various seating arrangements and decorations. People can be seen socializing as Tokyo Skytree stands prominently in the background. The vibrant sky transitions from orange to purple, creating a picturesque backdrop for gatherings.

4房 4卫浴 4台洗衣機 4廚房機場直達洗衣機電梯大樓 Skytree車站徒步5分

A rooftop terrace is showcased, featuring several seating arrangements including a circular table and chairs. The Tokyo Skytree stands prominently in the background against a clear blue sky, enhancing the view from this communal space.

3套卫浴 MAX14人 Skytree車站徒步5分 3间套房機場直達廚房洗衣機電梯

A rooftop terrace is filled with guests enjoying a gathering as the Tokyo Skytree towers in the background, illuminated by evening lights. Colorful decorations and furniture are arranged around the space, creating a lively atmosphere against a sunset backdrop.

Hotel room in Sumida City

頂樓超大露台看Skytree 3套卫浴車站徒步5分機場直達廚房洗衣機Amin Hotel

A spacious communal area features several large tables surrounded by red chairs. Along one wall, a shelf filled with books and magazines is visible. Modern kitchen appliances, including a microwave and coffee machine, are situated in a nearby cabinet.

4.6 out of 5 average rating, 10 reviews

Skytree車站徒步5分機場迪士尼直達廚房洗衣機 wifi 電梯 Amin Hotel

A spacious rooftop terrace offers a view of the iconic Skytree. Outdoor seating arrangements include a round table surrounded by four chairs and two lounge chairs, all set on a textured surface. Clear skies create a bright and open atmosphere.

澀谷直達 Skytree 地鐵徒步5分 2间套房 2套卫浴機場直達廚房洗衣機電梯

The hotel features a modern multi-story structure with large windows and an accessible entrance on the ground floor. A vibrant sign displays the hotel name prominently. The surrounding area includes a mix of buildings and clear blue skies, enhancing the urban atmosphere.

機場直達 Skytree車站徒步5分 2间套房 2套卫浴廚房洗衣機電梯 Amin Hotel

4.75 out of 5 average rating, 12 reviews

Three smart pods are displayed in a well-lit space. Each pod features a comfortable bed with a soft blanket and a spacious design. Mirrors and hangers are provided, contributing to the organized atmosphere of the sleeping area.

Hotel room in Shibuya

TheMillennialsShibuya/Smart Pod Girls Only/1 Guest

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Other boutique hotel vacation rentals

4.84 out of 5 average rating, 345 reviews

A spacious room features two queen beds and two daybeds, arranged around a central coffee table. Soft lighting is provided by exposed bulb fixtures. A large window offers outdoor views, while a wall-mounted television and circular mirror add functional elements to the design.

Hotel room in Kagurazaka

Superior Room | Shinjuku20m｜Kagurazaka

4.82 out of 5 average rating, 901 reviews

The hotel entrance is marked by large glass doors framed by a blend of beige and green tiled walls. A small garden is visible beside the entrance, with neatly arranged pavers leading to the main door.

Hotel room in Asakusa

全新開幕！2房1廳+吧台廚房！4-5人家庭房！浅草寺景觀！直通羽田＆成田機場！

A simple guest room is featured with a spacious bed dressed in a patterned comforter. A television is situated on a low wooden stand against the wall. Natural light enters through two windows, illuminating the neutral-toned walls and wooden flooring.

4.6 out of 5 average rating, 68 reviews

Skytree車站徒步5分機場迪士尼直達廚房洗衣機 wifi 電梯 Amin Hotel

4.85 out of 5 average rating, 1,337 reviews

An airy room features two spacious queen beds with neutral bedding, separated by glass partitions. Soft lighting illuminates the area, showcasing a cozy seating space in the background. Large windows allow natural light to fill the space, creating a welcoming atmosphere.

Hotel room in Kagurazaka

Executive Room 56㎡｜2Q+2SofaBed｜20 min Shinjuku

4.93 out of 5 average rating, 59 reviews

An authentic Japanese room featuring tatami flooring, creating a spacious and welcoming environment. Natural light filters through the window, which overlooks a cozy raised sleeping area with bedding. A minimalist closet with wooden accents enhances the clean design of the space.

Hotel room in Chuo City

Unique modern Japanese room, 4 subway sta. 5min!

The spacious living area showcases a modern design with a large seating arrangement featuring colorful cushions. A unique wooden coffee table sits at the center, surrounded by natural light from the windows. Built-in shelves line a wall, adding warmth and functionality to the space.

4.86 out of 5 average rating, 7 reviews

Spacious 3F Loft with Kitchen & Uniqueness Living

4.92 out of 5 average rating, 103 reviews

A serene double room is presented with a spacious bed dressed in crisp white linens. Soft lighting is provided by wall-mounted lamps on either side of the bed. A minimalist chair and small side tables accent the elegant gray walls, while a window allows natural light to fill the space.

Hotel room in Ueno

The Barn Tokyo - < Double room >