Boutique hotel vacation rentals in Shinjuku

Find and book unique boutique hotel rentals on Airbnb

Top-rated boutique hotel rentals in Shinjuku

Guests agree: these boutique hotel rentals are highly rated for location, cleanliness, and more.

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Guest favorite

Hotel room in Chuo City

4.93 out of 5 average rating, 100 reviews

90sqm. Tatami, traditional Japanese style room

Our room is featured real Japanese style. Many Japanese also love this simple and traditional space. It'll be chance to know real Japan! 3 subway 5 mins walk. Tukiji 5 mins by subway, Ginza, Akiba, Asakusa, 15mins by subway without transfer. Here is popular for large family trip. We have 3 separate room with bed and FUTON. Especially family with kids can choose many baby equipment. From NARITA Airport 55 min, HANEDA 25min. We can store your luggage before check-in or after check-out for free!

Superhost

A modern kitchen area is designed with sleek concrete and white subway tiles. Equipped with contemporary appliances, the space features a long wooden bar counter with high stools. Large windows provide ample natural light, enhancing the open and inviting atmosphere.

Hotel room in Ryōkoku

4.9 out of 5 average rating, 113 reviews

4 single beds in Tokyo/2 train stations : Studio A

We offer a quiet, modern & unique structured room with 4single beds & a private bathroom. 2train stations in 10minutes walk, easy access to Shinjuku, Shibuya, Akihabara, Asakusa, Tokyo Dome and Disney Resort! Not 24H open reception, you MUST arrive by 23PM. After this time you can not check in. ＊No early check in (Starts at 3PM). ＊No late check in (by 11PM). ＊No late check out (by 10AM). ＊No discount. ＊Maximum capacity : 4people. ＊For the environment room cleaning will be done once in 5nights.

Top guest favorite

A modern bathroom features a stylish, high-efficiency toilet and a contemporary sink set on a wooden countertop. An LED mirror provides ample lighting, while a decorative wall adds texture. Essential toiletries are neatly placed for convenience.

Hotel room in Toshima City

4.97 out of 5 average rating, 235 reviews

④2020年新築貸切/クイーンベッド/モダンバスルーム/Rain showerサンシャインシティ３分

Newly built with travelers in mind. The rooms are spacious with Queen size beds (practically unheard-of in Japan). Smart TV, Wi-Fi, tea and coffee. The bathrooms are fashionable, with large walk in rain showers. LED mirrors to get you ready for whatever lighting you will encounter. Rooms have a bar fridge, microwave and kettle for you to store and prepare ready-made meals and drinks. All rooms come equipped with Air-conditioning, ceiling fans and black-out curtains. Ample storage space also!

Top guest favorite

Hotel room in Akihabara

4.98 out of 5 average rating, 44 reviews

TOKYO DOME/AKIBA! Super location-house MTR1min 6p

上野に近い豪華な洋館の一部屋です。このリスティングは約50㎡の洋室を最大6人でステイする事ができます。部屋は個室で/5ベッド/1シャワー/トイレ/キッチン/洗面台が専用で使えます。ソファーセットもあります。とても賑やかな繁華街の中心に位置するので、飲食や遊び場所には困りません！反対に小さなお子様連れや、静かな環境を望む方にはお勧めしません。徒歩10分以内に７か所の駅があるので東京の何処へ行くのも便利です。こちらの宿泊先で刺激的で贅沢な滞在をお楽しみください。コンビニ/スーパー/ドン・キホーテ/MTR駅が徒歩１分です！ ★宿泊者全員の身分証明書の提示をお願いします★ ①日本に居住していないゲストの方はパスポートの画像 ②日本に居住しているゲストの方は国籍に関わらず、政府発行の身分証の画像を宿泊日前に送って頂きます。また同時に「宿泊者全員」の氏名、住所、性別、職業、国籍などの「宿泊者情報」を事前に記録して頂く必要があります。これらは日本の法律で定められておりますので、身分証明書の提出及び宿泊者情報の記載を行って頂けない場合には宿泊をお断りする事が御座います。

Guest favorite

An open dining area features a wooden table set for a meal, accompanied by elegant plates and drinks. In the background, a cozy sleeping space is highlighted by two stylish bunk beds. Soft lighting creates a relaxed ambiance.

Hotel room in Minato City

4.96 out of 5 average rating, 24 reviews

New! Central Tokyo Lux Suite | 3min to Sta | 8pax

Stay in our designer hotel in Minato Ward, Tokyo, just 3min from JR Tamachi Sta. and 6min from Mita Sta. This 50m² studio, designed by a rising architect A.Hamatani, accommodates up to 8 guests with four W beds, offering a blend of modern style and comfort. With direct access from Narita (64min) and Haneda (32min) airports, and easy train links to Tokyo Tower, Roppongi, and Ginza, it’s perfect for sightseeing. Nearby, enjoy excellent restaurants &stores. Ideal for groups, families & biz use.

Top guest favorite

A uniquely designed room features two spacious beds draped with light bedding. A natural wood wall showcases artistic murals of cranes and clouds. Soft lighting from wall sconces enhances the serene environment, while a small table with items is positioned at the center.

Hotel room in Toshima City

4.98 out of 5 average rating, 177 reviews

" Shishi No Ma " at Sunpika「獅子の間」2022年オープンの小さなアート宿

SUNPIKAはすべて建築士チームでオリジナルに設計した3部屋のみの客室で、木造作りの新築になります。鉄筋構造と違い、音の響きがありますので、夜間の大きな話声などにはお気をつけ頂けると助かります。各お部屋内の畳マットの上は「靴」も「サンダル」も脱いでご使用ください。畳マットの手前までは土足で大丈夫です。日本の若き匠の方々と、アーティストの黒田潔氏による壁画で繊細に描かれた「夢幻能」をテーマとした、唯一無二の宿です。旅人の夢の中が舞台とされる「夢幻能」の能の演目から、SUNPIKA独自の世界観を描いた宿の舞台では、その旅の続きを夢の中で楽しんで頂きたいという発想から、この地に「いにしえ」から生息する自然界のモチーフと成獣たちを構成し、ひときわ幻想の世界に癒してもらえたらと願っています。SUNPIKAのホームページに詳しいアートの解説があります。 JR山手線の大塚駅から徒歩4分 *The room is private & self check in and out. *JR Yamanote line to Shinjuku 10min / Shibuya 18min

Superhost

A comfortable guest room features two spacious beds, each adorned with rust-colored decorative pillows. Natural light floods the space through large windows that offer views of the balcony, complemented by soft, neutral-colored curtains.

Hotel room in Asakusa

4.86 out of 5 average rating, 959 reviews

全新開幕！2房1廳+吧台廚房！4-5人家庭房！浅草寺景觀！陽台晴空塔夜景！直通羽田＆成田機場！

the Moto Hotel Asakusa is a new hotel opened in June 2021. The nearest station is Ginza sen-Asakusa station 7-8mins by walking. JR Ueno station is walking by 30 mins or 3 steps by Ginza Line(from Asakusa station to Ueno station)is 6 mins. Askusa is famous for the Sensō-ji and it's only 1min from us. The development of Asakusa as an entertainment district during the Edo period so there's many delicious & traditional food & store surround us. The Kappabashi Dougu street is 7mins by foot too.

Guest favorite

A spacious room with two double beds is illuminated by soft lighting. A comfortable seating area features a rocking chair, while large windows provide natural light. Lush green carpet complements the modern decor, enhancing the room's overall space and inviting atmosphere.

Hotel room in Kagurazaka

4.93 out of 5 average rating, 67 reviews

【最大8名宿泊可能】ハンモック付き76平米タブルベッド4台 | 奥神楽坂の新築ブティックホテル

1大人数グループでのご利用におすすめです。 76平米、最大8名まで宿泊可能(デイベッド使用時) シモンズ社製ベッドのダブルベッドが4台の奥行きがある客室空間です。 ※一時的なご利用であっても8名を超えるご利用はできません。 Capacity : 8名 Size of Rooms : 76m² Bed : ダブルベッド4台、デイベッドソファ2台 ■客室設備 WiFi/エアコン/冷蔵庫（1ドア）/空気清浄機/金庫/テレビ（43型）/ドライヤーその他貸し出し物（DVDプレイヤーやコード）のご用意はございません。 ■アメニティシャンプー/コンディショナー/ボディソープ/ハンドソープ/バスタオル/ハンドタオル/ガウン/スポンジ/カミソリ/ヘアブラシ/コットンセット/歯ブラシ/スリッパ ■駐車場提携の駐車場はございませんので、お近くのコインパーキングをご利用ください。 ■貸し出し備品ご希望の場合はフロントにてお申し付けください。備品はそれぞれ数に限りがございます。＜有料＞ヘアアイロン/ボードゲーム/プロジェクター/FireTVstick/装飾バルーン

Superhost

The room features a spacious bed against a mirrored wall, with subtle lighting from the ceiling reflecting vibrant shades of blue and red. Sleek black flooring and a decorative rug add to the modern design. A frosted glass door leads to a private area.

Hotel room in Shinjuku City

4.86 out of 5 average rating, 21 reviews

Free late check out ②

Located in the heart of Kabukicho, the world's biggest entertainment district. 20 minutes walk from Shinjuku Station East Exit. A quick taxi ride. 15 minutes from Higashi-Shinjuku Station to Roppongi. A love hotel = motel, but with a different design. There are no hotels in this location at this price. このエリアはラブホテルエリアですが近年はairbnbで貸し出す事多いです。お子様や一般的なホテルを希望の方には不向きです一般のホテルより広く快適です金額も平均相場より安いと思います Rooms will be assigned randomly. Your room may differ from the one pictured.

Superhost

A modern living space features a spacious seating area with a large, L-shaped sofa adorned with decorative cushions. Large windows bring in natural light, complemented by green potted plants and a small coffee table positioned in front of the sofa.

Hotel room in Shimokitazawa

4.95 out of 5 average rating, 149 reviews

illi Sun Shimokitazawa 301 | 1 min from station

【1 min walk from Shimokitazawa Stn / Max 6 guests/ Entire floor to yourself】 Each of our four rooms features a unique design, adorned with elements that capture the essence of Shimokitazawa's cultural richness and charm. Tailored for travelers in search of a luxurious and playful retreat after exploring the lively streets and vibrant city center. Enter a realm where you can unwind and detach from Tokyo's hectic urban rhythm in a truly remarkable setting.

Superhost

A modern lounge area features spacious, modular seating in a blend of grey and vibrant yellow tones. Large windows allow natural light to fill the space, complemented by green plants that add a touch of nature. Two individuals are seated comfortably, using laptops.

Hotel room in Shibuya

4.82 out of 5 average rating, 125 reviews

TheMillennialsShibuya/Mixed Smart Pod/1 Guest

Welcome to The Millennials Shibuya, a futuristic accommodation facility equipped with the world's first IOT-equipped "Smart Pod" and a lounge with a coworking space. In addition, there are plenty of common spaces, including a 24-hour shared lounge, a 24-hour self-kitchen, a 24-hour working lounge, a shared shower and toilet, and a shared laundry. 20% of the total area of the hotel is allocated to the common area.

Superhost

A serene view of a waterway is captured, lined with traditional wooden boats docked alongside modern buildings. The calm water reflects the blue sky and surrounding architecture, creating a balanced composition of urban and cultural elements.

Hotel room in Asakusabashi

4.72 out of 5 average rating, 151 reviews

PEGASUS HOTEL (Japanese room) 302

Hi This is Pegasus Hotel New open in 2020, we have two types of standard double rooms and family rooms. The environment is clean and tidy. It is a three-minute walk from Asakusa Bridge Station. , Every year will have Sumidagawa Fireworks Festival, Japanese traditional culture boat house you also can have a nice dinner in the boat, you can have a good time in nearby Tokyo Bay Odaiba Rainbow Bridge, etc.